CDS

Accession Number TCMCG057C35117
gbkey CDS
Protein Id XP_018440074.1
Location join(37921734..37922013,37922154..37923256,37923446..37923622,37923704..37923817,37923984..37924088,37924413..37924547,37924619..37924674,37924769..37924871,37924962..37925078,37925325..37925451,37925621..37925751,37925878..37926267)
Gene LOC108812334
GeneID 108812334
Organism Raphanus sativus

Protein

Length 945aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018584572.1
Definition PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description Minichromosome loss protein, Mcl1, middle region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11274        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAAGTCACGAACGCTTAAACTCCGTGAAGCCCATAAAGTCGGCGGAAGCGCCGCCGCGTTTTGCTCGATCCTCTGGGACCACAAAGCCGAACACTTCGTCACTTCCTCTTCTTCGGATCCATCCATCTCCGTCCACGATGGACTCTCCCCTTCCTCTTCCCCACCGACGATCCTCCGACATCACCAAGACGGCGTCACCGCCTTGGCTCTTAGCCAGGACTCCTCGTTCCTCGCCTCTGGATCTATTGATCACTGCGTCAAGCTCTACAGATTCCCAAGTGGAGAGTTTCAGACGAACATAACAAGATTCACGCTCCCGATTCGCGTGCTTGCCTTCAACGGCTCAGGGAGCTTATTAGCAGCTGCTGGAGACGACGAAGGAATCAAACTAATCAACACGATCGACGGCTCCATCGTCCGAGTTCTGAAAGGGCACAAAGGACCAGTGACCGGCCTTGATTTCAACCCTAACGGCGAGCTCTTGGCTTCGCTAGACTCGAACGGGACTGTCCTCTGCTGGGAGCTCCAGAGCGGAACCGTTTCCTACACTCTCAAGGGCGCTGCTCCCGACACTGGTTTCAGCACTTCCGTTGTGAATGTTCTTAGATGGAGCCCCGACGGTCGGATCCTCGCGGTGCCTGGTCTGAGGAACGACGTGGTGATGTACGATAGGTTCACAGGGGAGAAGCTTTTCGCGCTGAGAGGGGACCATCTTGAGTCTGTTTGCTACGTGACGTGGGCTCCTAACGGGAAGTATATAGCTACTTCTGGTATGGATAAGCAAGTGCTTCTCTGGGATGTTGAGAAGAGGCAAGACATCGATAGGCAGAGGTTCGAGGAGAGGGTGTGTTGTATGTCGTGGAAGCCTAATGCTAATGCTTTGTCTGTGATTGATGTCAGGGGGAGATATGGGATTTGGGAATCTTTGGTTCCATCGTCGATGGTTGGTCCTACTGTTGGTATCCCTGACATATTGCCAAAGAGGAGGAATGAGATTCTTCCTTTTGATGAGGAAATGGAGGAAGAACTATGTCCGAGTCTAAATGATGATGATGATGATGGTGATGGTGGTGGAGAATCTCATCAGCCTAGGAGGAAAAGAATCAGGAGAAAAACTTTTATTGATGATGATGATGTTGATGTTGATCCAGATGAGGATTTTTATGATGAGGGTAGCAGCATACCTGGCTACAGGAAAAAAACACACGGTGTGAGAAGTGGGGTTCCTACTAGAAGCATTGCCCGATCAACCAAGTTCAAAATGCAAAAGCCTTTTCAACCTGGTGCAACACCCCCGGAACAAGGAAAGAGGACATTCTTGTGTTACAGTATGTTGGGATGCATAACTACAATTGAACACGAGGGGAACTACCGTATTGAGACTGATTTTCATGATACTGGAAGAGGTCCACGAGTTTCATCAATGATCGACATCTATGGCTTCACTATGGCATCCATAAATGAAAATGGATGCGTCTTTGCAAACCCCAGCAAGGGAGAAAAGAACATGAGTGTTCTTATGTATCGACCATTCAAAAGCTGGGCCAGTAATAGTGAGTGGACAATGAGGTTTGAAGGTGAAGAGGTGAAGGTTGTCGCTAACGGTTCTGGTTGGGTAGCTGCGATTACAAGCCTTAATTTGCTTCGCATATTTAGCGAGGGTGGTTTACAGAAACATGTTATTTCCCTTGATGGCCCCGTCGTCACTGCAACAGGGTGCAAGGATCAACTTGCTGTGGTAACTCATGTTTCAGACTGTCTTCCTTCAAATGAACAGGTGATGGAATTTAGAGTCTTCAACATATCCAAAATGACTCAACAGTTGAACGGCCGTGTTGCCTTAACCCCTGGCTCACGTTTAACATGGATAGGATTCAGTGAGGAAGGTTCATTCAGCTCATTTGATTCTGAGGGTGTGCTGAGGGTTTTTACTAGTCAATATGGTGGCTCGTGGATCCCAATCTTCAGTACTGCTAAAGTGAAGAAACAAGAAGAAAACTACTGGGTGGTTGGTTTGAACAAAACCAGTTTATGCTGTATAGCTTGTAAACACCCAGAACTATTCCCACAGGTGACACCAAAACCAATCCTTAGCATTCTGGACTTCTCCCTCCCGCTCGCATCTTCAGATTTAGGAGCAGCATCTCTAGAAAACGAGTTCATTCTAAATCAGCTGCGTTTATACGAGACTCAGAGAAAGGTGGACGATATGGCTGTTGCCGAGGTGGACACGACAGCACTGGAAGATGAGGCTTTCGACCTGGAAGTTTCTCAAGATAAATGCATACTAAGGCTCATCAGCTCGTGTTGTACCAGTGACAAGTTTGTAAAGGCCGGTGAACTTATGAGGTTACTATCTCTAGAAAAATCAATGAGAGCCGCAATAACACTGGTTACCAAACTCAAGCTTCCATTCTTGGCAGAGACATTCTGTAGCATACTCGAGGAAAAGTTGCTCGAAGAAGCTAACGATGCGAACGCAAATCATCCGCAAAATTCAAGCAGAGGAGTTGTTAAATCCGAGGTCCAGAATTCTCCGGCTCCGGTTCAGACAAGAGAGAACACAGAGGCAAATCTAAAAGCTTCTGCACCTAAACCTTCTGCTACTACAGTTGTTAGGAAAGCAAAAGTTTCCGAAGGTCTCAAGCTGGGAAAAGAACAAATAAAGAGAGACGAAACTGACGATGTGAAGAAAAGAGAGGTAAATAAATTGAACTTGATAAAGAATCCTGTGAACCGTGTTAACAATGAAGACAAGGGCAAGGGACTGAGAAAGGAAGCGAATCAACAAGACGCACGACCTTCTTCAAACCCGTTCCTGAAATCAATTGTTTAA
Protein:  
MKSRTLKLREAHKVGGSAAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSPSSSPPTILRHHQDGVTALALSQDSSFLASGSIDHCVKLYRFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTIDGSIVRVLKGHKGPVTGLDFNPNGELLASLDSNGTVLCWELQSGTVSYTLKGAAPDTGFSTSVVNVLRWSPDGRILAVPGLRNDVVMYDRFTGEKLFALRGDHLESVCYVTWAPNGKYIATSGMDKQVLLWDVEKRQDIDRQRFEERVCCMSWKPNANALSVIDVRGRYGIWESLVPSSMVGPTVGIPDILPKRRNEILPFDEEMEEELCPSLNDDDDDGDGGGESHQPRRKRIRRKTFIDDDDVDVDPDEDFYDEGSSIPGYRKKTHGVRSGVPTRSIARSTKFKMQKPFQPGATPPEQGKRTFLCYSMLGCITTIEHEGNYRIETDFHDTGRGPRVSSMIDIYGFTMASINENGCVFANPSKGEKNMSVLMYRPFKSWASNSEWTMRFEGEEVKVVANGSGWVAAITSLNLLRIFSEGGLQKHVISLDGPVVTATGCKDQLAVVTHVSDCLPSNEQVMEFRVFNISKMTQQLNGRVALTPGSRLTWIGFSEEGSFSSFDSEGVLRVFTSQYGGSWIPIFSTAKVKKQEENYWVVGLNKTSLCCIACKHPELFPQVTPKPILSILDFSLPLASSDLGAASLENEFILNQLRLYETQRKVDDMAVAEVDTTALEDEAFDLEVSQDKCILRLISSCCTSDKFVKAGELMRLLSLEKSMRAAITLVTKLKLPFLAETFCSILEEKLLEEANDANANHPQNSSRGVVKSEVQNSPAPVQTRENTEANLKASAPKPSATTVVRKAKVSEGLKLGKEQIKRDETDDVKKREVNKLNLIKNPVNRVNNEDKGKGLRKEANQQDARPSSNPFLKSIV